I hate joining topics when there are soooooo many posts......
First of all...... Did the same garage that loaded the Revo software do this conversion for you? They did not 'map' it in the sense you are thinking of and have simply loaded it to the car. They have also fitted second hand parts at your request and as such i doubt there is any warranty on any of the work provided. That being said they should have logged the car to setup the software and would then be aware of this issue. From then on they should have asked you what you wanted them to do.....
Secondly - Have you fitted the S3(K04) injectors at the same time? As you don't mention this........ If you are running the correct injectors and an uprated fuel pump then you would have plenty of fuel available for Revo Stage 3.
As was already discussed, do not change any engine sensors, you need to keep the 2.5 bar map sensor and standard rail pressure sensor too. How are you recording the 23 psi spike? standard sensor will only see 'up to' 1.55 bar of boost depending on atmospheric pressure at the time. Need to see a specified boost plot as it could be the ECu pulling back due to a boost spike, which could be down to something as simple as actuator preload
Can you post the full log up and not just dissected bits of info? You state you're only dropping 6-9 bar of pressure from requested, i.e. so you're maintaining over 120 bar of rail pressure....... if so this should be enough to not see anywhere near 25% fuel trim adaption. I'd be looking back to having the correct injectors fitted again.....
Full log of boost control, lambda control/request, fuel pressure, ignition timing, injection time, etc etc. Take a look here for help with the measuring blocks:
http://www.goapr.co.uk/support/datalogging.php