I bought my Ed30 in 2010 and it suffered from this, VW diagnosed leaky injectors and had them cleaned professionally. I was without the car for weeks while all this was done, and it didn't improve things. If I came off the starter too early it was very clunky and passengers would notice. The best way to combat it was to keep the key turned - I'd be interested to know if this helps you at all. It was never a smooth start even doing this but it did help so much so other people wouldn't notice. You'll always be able to tell as you'll be fixated on it now, trust me!
Have a search on here, people have replaced fuel pumps, batteries etc. and it doesn't help. I sold my ED30 in 2012 and bought a ED35 with the same engine and now own an R. The Ed35 in the 12 months I owned it never had the problem, but my R (on a 62 plate) has done this a few times and it's because I come off the starter too early. Instinct kicks in when you start a car and it's almost like we're programed to release our grip on the key once the engine fires (so we don't over run the starter like you would with an older car) but by doing this slightly too early it seems to cause havoc to the engine levelling out from a cold start.
Like yours, my ED30 only did this if it had stood and I let this stress me out buddy - have a go with just keeping that key turned and see if you can improve it from a cold start by doing this. If you can, I highly recommend forgetting about it and enjoy the car. It won't get worse, I can assure you. I lived with it for 3 years
Good luck!